G00367NK

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Collection All Motifs
Accession G00367NK
Name(s) Xylogalacturonan
Keyword(s)
Aglycon
Reducing-End Only?
Alignment Substructure
GlyTouCan Accession G00367NK
Cross Reference(s)
Reference(s)
Same As GE.EP0501
Topology Cluster
GlycoCT

RES 1r:r1 REP REP1:8o(4+1)2d=-1--1 RES 2b:a-dgal-HEX-1:5|6:a 3b:a-dgal-HEX-1:5|6:a 4b:a-dxyl-PEN-1:5 5b:a-dgal-HEX-1:5|6:a 6b:a-dgal-HEX-1:5|6:a 7b:a-dxyl-PEN-1:5 8b:a-dgal-HEX-1:5|6:a 9b:a-dxyl-PEN-1:5 LIN 1:2o(4+1)3d 2:3o(3+1)4d 3:3o(4+1)5d 4:5o(4+1)6d 5:6o(3+1)7d 6:6o(4+1)8d 7:8o(3+1)9d UND UND1:-1.0:-1.0 ParentIDs:2 SubtreeLinkageID1:o(6+1)n RES 10s:methyl UND2:-1.0:-1.0 ParentIDs:3 SubtreeLinkageID1:o(6+1)n RES 11s:methyl UND3:-1.0:-1.0 ParentIDs:5 SubtreeLinkageID1:o(6+1)n RES 12s:methyl UND4:-1.0:-1.0 ParentIDs:6 SubtreeLinkageID1:o(6+1)n RES 13s:methyl UND5:-1.0:-1.0 ParentIDs:8 SubtreeLinkageID1:o(6+1)n RES 14s:methyl

WURCS
WURCS=2.0/2,8,8/[a2112A-1a_1-5_6%?%*OC][a212h-1a_1-5]/1-1-2-1-1-2-1-2/a4-b1_b3-c1_b4-d1_d4-e1_e3-f1_e4-g1_g3-h1_a1-g4~n


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

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