000040

From GlycoMotif
Jump to navigation Jump to search

Prev / Next


Collection GlyGen Motifs
Accession 000040
Preferred Name Blood group A1 (type 3)
Name(s) Blood group A1 (type 3)
Keyword(s) Blood group A
Blood group type 3
Aglycon R
Reducing-End Only? false
Alignment Substructure
GlyTouCan Accession G44060QH
Cross Reference(s) GlycanDictionary:GD000031
Reference(s) Cummings (2009) The repertoire of glycan determinants in the human glycome
Clausen et al. (1985) Repetitive A epitope (type 3 chain A) defined by blood ...
Same As GD.R000212, GDC.000040, GDH.000158, GDV.000055, GM.G44060QH
Topology Cluster
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-lgal-HEX-1:5|6:d 5b:a-dgal-HEX-1:5 6s:n-acetyl 7b:b-dgal-HEX-1:5 8b:a-lgal-HEX-1:5|6:d 9b:a-dgal-HEX-1:5 10s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3o(2+1)4d 4:3o(3+1)5d 5:5d(2+1)6n 6:5o(3+1)7d 7:7o(2+1)8d 8:7o(3+1)9d 9:9d(2+1)10n

WURCS
WURCS=2.0/4,7,6/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5][a2112h-1a_1-5_2*NCC/3=O]/1-2-3-4-2-3-4/a4-b1_b2-c1_b3-d1_d3-e1_e2-f1_e3-g1


Alignments

Download: Strict Motif Alignments, All Motif Alignments.

Note: This page is automatically generated, please comment, make notes, or propose changes on the Discussion page.